Publications

Wee, CW and Dinneny, JR (2010) Tools for high-spatial and temporal-resolution analysis of environmental responses in plants. Biotechnology Letters 32: 1361-1371.

Dinneny, JR (2010) Analysis of the salt-stress response at cell-type resolution. Plant, Cell & Environment 33: 543–551.

Orlando DA, Brady SM, Koch JD, Dinneny JR, Benfey PN (2009) Manipulating large-scale Arabidopsis microarray expression data: identifying dominant expression patterns and biological process enrichment. Methods in Molecular Biology 553:57-77

Dinneny JR, Long TA, Wang JY, Mace D, Pointer S, Barron C, Brady SM, Schiefelbein, JS, Benfey PN (2008) Cell identity mediates the response of Arabidopsis roots to abiotic stress. Science May 16;320(5878):942-5 (‘Perspectives’ in Science 16;320:880-1, ‘Research Highlights’ in Nature Genetics 9, 414)

Filiault D, Wessinger C, Dinneny JR, Lutes J, Borevitz J, Weigel D, Chory J, and Maloof JN (2008) Amino acid polymorphisms in Arabidopsis Phytochrome B causes differential response to light. Proc. Natl. Acad. Sci. Feb 26;105(8):3157-62

Brady SM, Orlando D, Lee JY, Wang JY, Koch J, Dinneny JR, Mace D, Ohler U, Benfey PN (2007) A high-resolution root spatiotemporal map reveals dominant expression patterns. Science Nov 2;318(5851):801-6

Dinneny JR, Weigel D, Yanofsky MF (2006) NUBBIN and JAGGED define stamen and carpel shape in Arabidopsis. Development 133, 1645-1655 (Cover issue)

Dinneny JR, Weigel D, Yanofsky MF (2005) A genetic framework for fruit patterning in Arabidopsis. Development 132, 4687-4696 (Cover issue)

Dinneny JR, Yadegari R, Fischer RL, Yanofsky MF, Weigel D (2004) The role of JAGGED in shaping lateral organs. Development 131, 1101-1110 (‘Previews’ in Developmental Cell 6(3), 318-319)

Wu X, Dinneny JR, Crawford KM, Rhee Y, Citovsky V, Zambryski PC, Weigel D (2003) Modes of intercellular transcription factor movement in the Arabidopsis apex. Development 130, 3735-3745.

Kiyosue T, Ohad N, Yadegari R, Hannon M, Dinneny J, Wells D, Katz A, Margossian L, Harada J, Goldberg R, Fischer RL (1999) Control of fertilization-independent-endosperm development by the MEDEA polycomb gene in Arabidopsis. Proc. Natl. Acad. Sci. 96, 4186-4191.

Reviews and Book Chapters
Dinneny JR (2009) Analysis of the salt-stress response at cell-type resolution. Plant Cell & Environment PMID 19843253

Dinneny JR, Benfey PN (2009) Studying root development using a genomic approach. Annual Plant Reviews, Volume 37, Root DevelopmentChapter 12: 325-351 Blackwell Publishing

Dinneny JR and Benfey PN (2008) Plant stem cell niches: standing the test of time. Cell Feb 22;132(4):553-7

Dinneny JR and Benfey PN, (2005) Stem cell research goes underground: the RETINOBLASTOMA-RELATED gene in root development. Cell 123, 1180-1182

Dinneny JR and Yanofsky MF (2005) Drawing lines and borders: how the dehiscent fruit of Arabidopsis is patterned. Bioessays 27, 42-49

Dinneny JR and Yanofsky MF (2004) Floral Development: An ABC Gene Chips in Downstream. Curr. Biol. 14, R840-R841

Dinneny JR and Yanofsky MF (2004) Vascular Patterning: Xylem or Phloem? Curr. Biol. 14, R112-R114