Publications -2010

  • Kawaguchi, S, CL Hsu and DTW Ng. 2010. Interplay of Substrate Retention and Export Signals in Endoplasmic Reticulum Quality Control. PLoS ONE 5: e15532.
  • Xie, W and DTW Ng. 2010. ERAD substrate recognition in budding yeast. Seminars in Cell & Developmental Biology 21: 533-539.
  • Sangha, JS, K Gu, J Kaur and Z Yin. 2010. An improved method for RNA isolation and cDNA library construction from immature seeds of Jatropha curcas L. BMC Research Notes 3: 126.
  • Saju, J.M., W-J. Lee and L. Orbán: Characterization of nine novel microsatellites isolated from Mozambique tilapia, Oreochromis mossambicus, Conservation Genetics Resources 2: 385–387 (2010)
  • Chen, HY and YA Yuan. 2010. Crystal Structure of Mj1640/DUF358 Protein Reveals a Putative SPOUT-Class RNA Methyltransferase. Journal of Molecular Cell Biology 2: 366-374.
  • He, F, RD Soejoedono, S Murtini, M Goutama and J Kwang. 2010. Complementary monoclonal antibody-based dot ELISA for universal detection of H5 avian influenza virus. BMC Microbiology 10: 330.
  • Liao, M, C Li, J Qi and Y Hong et al. 2010. Isolation and characterization of 11 polymorphic microsatellite loci for Gmelina arborea (Permanent Genetic Resources added to Molecular Ecology Resources Database 1 June 2010 – 31 July 2010). Molecular Ecology Resources 10: 1106–1108.
  • Li, C, MH Sman, Y Fong and Y Hong et al. 2010. Isolation and characterization of 18 polymorphic microsatellite loci for Pterocarpus indicus (Leguminosae) [Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 – 31 May 2010]. Molecular Ecology Resources 10: 1098–1105.
  • Li, C, Y Fong and Y Hong et al. 2010. Isolation and characterization of 13 polymorphic microsatellite loci for Khaya senegalensis (Meliaceae) [Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2010 – 31 May 2010]. Molecular Ecology Resources 10: 1098–1105.
  • Hong, Y. 2010. Jatropha Curcas: A Solution for a Sustainable Energy Supply? In Energy Issues in the Asia-Pacific Region (eds. Amy Lugg and Mark Hong) Institute of Southeast Asian Studies. Chapter 11: 265-271.
  • Ingouff, M, S Rademacher, S Holec, L Šoljić, X Nie, A Readshaw, SH Foo, B Lahouze, S Sprunck and F Berger. 2010. Zygotic Resetting of the HISTONE 3 Variant Repertoire Participates in Epigenetic Reprogramming inArabidopsis. Current Biology 20: 2137-2143.
  • Yi, C, S Zhang, X Liu, HTN Bui and Y Hong. 2010. Does epigenetic polymorphism contribute to phenotypic variances in Jatropha curcas L.? BMC Plant Biology 10:259.
  • Gilligan, PC, P Kumari, S Lim, A Cheong, A Chang and K Sampath. 2010. Conservation defines functional motifs in the squint/nodal-related 1 RNA dorsal localization element.Nucleic Acids Research: doi: 10.1093/nar/gkq1185.
  • Hou, X, LYC Lee, K Xia, Y Yan and H Yu. 2010. DELLAs Modulate Jasmonate Signaling via Competitive Binding to JAZs. Developmental Cell 19:884-894.
  • Papadopoulou, K, JS Chen, E Mead, A Feoktistova, C Petit, M Agarwal, M Jamal, A Malik, A Spanos, SG Sedgwick, J Karagiannis, MK Balasubramanian, KL Gould and CJ McInerny. 2010. Regulation of cell cycle-specific gene expression in fission yeast by the Cdc14p-like phosphatase Clp1p. Journal of Cell Science 123: 4374-4381.
  • Ji, P, V Yeh, T Ramirez, M Murata-Hori and HF Lodish. 2010. Histone deacetylase 2 is required for chromatin condensation and subsequent enucleation of cultured mouse fetal erythroblasts. Haematologica 95: 2013-2021.
  • de la Paz Fernández, M, YB Chan, JY Yew, JC Billeter, K Dreisewerd, JD Levine and EA Kravitz. 2010. Pheromonal and Behavioral Cues Trigger Male-to-Female Aggression in Drosophila. PLoS Biology 8: e1000541.
  • Chang, KC, G Garcia-Alvarez, G Somers, R Sousa-Nunes, F Rossi, YY Lee, SB Soon, C Gonzalez, W Chia and H Wang. 2010. Interplay between the Transcription Factor Zif and aPKC Regulates Neuroblast Polarity and Self-Renewal. Developmental Cell 19: 778-785.
  • Jiang, SY and S Ramachandran. 2010. Assigning biological functions to rice genes by genome annotation, expression analysis and mutagenesis. Biotehcnology Letters 32: 1753-1763.
  • Prabakaran, M, F He, T Meng, S Madhan, Y Tan, Q Jia and J Kwang. 2010. Neutralizing Epitopes of Influenza Virus Hemagglutinin: Target for the Development of a Universal Vaccine against H5N1 Lineages. Journal of Virology 84: 11822-11830.
  • Castagnetti, S, S Oliferenko and P Nurse. 2010. Fission Yeast Cells Undergo Nuclear Division in the Absence of Spindle Microtubules. PLoS Biology 8: e1000512.
  • Yue, GH and A Chang. 2010. Molecular Evidence for High Frequency of Multiple Paternity in a Freshwater Shrimp Species Caridina ensifera. PLoS ONE 5: e12721.
  • Chua, TH, CYH Leung, HE Fang, CK Chow, SK Ma, SF Sia, IHY Ng, SG Fenwick, CM James, SB Chua, ST Chew, J Kwang, JSM Peiris and TM Ellis. 2010. Evaluation of a Subunit H5 Vaccine and an Inactivated H5N2 Avian Influenza Marker Vaccine in Ducks Challenged with Vietnamese H5N1 Highly Pathogenic Avian Influenza Virus. Influenza Research and Treatment 2010, Article ID 489213.
  • Wee, CW and JR Dinneny. 2010. Tools for high-spatial and temporal-resolution analysis of environmental responses in plants. Biotechnology Letters 32: 1361-1371.
  • Ray, S, K Kume, S Gupta, W Ge, M Balasubramanian, D Hirata and D McCollum. 2010. The mitosis-to-interphase transition is coordinated by cross talk between the SIN and MOR signaling pathways in ,Schizosaccharomyces pombe. The Journal of Cell Biology 190: 793-805.
  • Bulchand, S, SD Menon, SE George and W Chia. 2010. Muscle wasted: a novel component of the Drosophila histone locus body required for muscle integrity. Journal of Cell Science 123: 2697-2707.
  • Hilgers, V, N Bushati and SM Cohen. 2010. Drosophila microRNAs 263a/b Confer Robustness during Development by Protecting Nascent Sense Organs from Apoptosis. PLoS Biology 8: e1000396.
  • Xia, JH, F Feng, G Lin, CM Wang and GH Yue. 2010. A First Generation BAC-Based Physical Map of the Asian Seabass (Lates calcarifer). PLoS ONE 5: e11974.
  • Liu, M, TM Lim and Y Cai. 2010. The Drosophila Female Germline Stem Cell Lineage Acts to Spatially Restrict DPP Function Within the Niche. Science Signaling 3: ra57.
  • Sundaramoorthy, S, JBG Goh, S Rafee and M Murata-Hori. 2010. Mitotic Golgi vesiculation involves mechanisms independent of Ser25 phosphorylation of GM130. Cell Cycle 9: 3100-3105.
  • Mori, K, Y Shikichi, S Shankar and JY Yew. 2010. Pheromone synthesis. Part 244: Synthesis of the racemate and enantiomers of (11Z,19Z)-CH503 (3-acetoxy-11,19-octacosadien-1-ol), a new sex pheromone of male Drosophila melanogaster to show its (S)-isomer and racemate as bioactive. Tetrahedron 66: 7161-7168.
  • Xi, W, C Liu, X Hou and H Yu. 2010. MOTHER OF FT AND TFL1 Regulates Seed Germination through a Negative Feedback Loop Modulating ABA Signaling in Arabidopsis. The Plant Cell 22: 1733–1748.
  • Li, ZQ, JL Li, XY Feng, N Xie, JB Feng and GH Yue. 2010. Sixteen polymorphic microsatellites for breeding of Chinese soft-shelled turtle (Pelodiscus sinensis). Animal Genetics 41: 446-447.
  • Dinneny, JR. 2010. Analysis of the salt-stress response at cell-type resolution. Plant, Cell & Environment 33: 543–551.
  • Ng, KH and T Ito. 2010. Shedding light on the role of AT-hook/PPC domain protein in Arabidopsis thaliana. Plant Signaling & Behavior 5: 200-201.
  • Jiang, SY and S Ramachandran. 2010. Natural and artificial mutants as valuable resources for functional genomics and molecular breeding. International Journal of Biological Sciences 6: 228-251.
  • Li, C, Y Fong and Y Hong et al. 2010. Isolation and characterization of 24 polymorphic microsatellite loci for the rain tree, Samanea saman (Leguminosae) [Permanent Genetic Resources added to the Molecular Ecology Resources Database 1 February 2010–31 March 2010]. Molecular Ecology Resources 10: 751-754.
  • Liu, X, HY Law, YM Tan and Y Hong. 2010. High-throughput β-thalassemia carrier screening by allele-specific Q-primer real-time polymerase chain reaction. Analytical Biochemistry 404: 97-99.
  • Qiu, C, JS Sangha, F Song, Z Zhou, A Yin, K Gu, D Tian, J Yang and Z Yin. 2010. Production of marker-free transgenic rice expressing tissue-specific Bt gene. Plant Cell Reports 29: 1097-1107.
  • Thajuddin, N, G Muralitharan, M Sundaramoorthy, R Ramamoorthy, S Ramachandran, MA Akbarsha and M Gunasekaran. 2010. Morphological and genetic diversity of symbiotic cyanobacteria from cycads. Journal of Basic Microbiology 50: 254-265.
  • Patkar, RN, A Suresh and NI Naqvi. 2010. MoTea4-Mediated Polarized Growth Is Essential for Proper Asexual Development and Pathogenesis in Magnaporthe oryzae. Eukaryotic Cell 9: 1029-1038.
  • Yue, GH, JL Li, ZY Bai, CM Wang and F Feng. 2010. Genetic diversity and population structure of the invasive alien red swamp crayfish. Biological Invasions 12: 2697-2706.
  • Aw, SJ, Y Hamamura, Z Chen, A Schnittger and F Berger. 2010. Sperm entry is sufficient to trigger division of the central cell but the paternal genome is required for endosperm development in Arabidopsis. Development 137: 2683-2690.
  • Jullien, PE and F Berger. 2010. DNA methylation reprogramming during plant sexual reproduction? Trends in Genetics 26: 394–399.
  • Prasad, R, S Kawaguchi and DTW Ng. 2010. A Nucleus-based Quality Control Mechanism for Cytosolic Proteins. Molecular Biology of the Cell 21: 2117–2127.
  • Yang, W, D Jiang, J Jiang and Y He. 2010. A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis. The Plant Journal 62: 663 - 673.
  • Zhang, D, A Vjestica and S Oliferenko. 2010. The Cortical ER Network Limits the Permissive Zone for Actomyosin Ring assembly. Current Biology 20: 1029-1034.
  • Madhan, S, M Prabakaran and J Kwang. 2010. Baculovirus as Vaccine Vectors. Current Gene Therapy 10: 201-213.
  • Xia, JH and GH Yue. 2010. Identification and analysis of immune-related transcriptome in Asian seabass Lates calcarifer. BMC Genomics 11:356.
  • Low, SH, S Mukhina, V Srinivas, CZ Ng and M Murata-Hori. 2010. Domain analysis of a-actinin reveals new aspects of its association with F-actin during cytokinesis. Experimental Cell Research 316: 1925-1934.
  • Yue, GH and L Orban. 2010. Novel Polymorphic Microsatellites from Guppy (Poecilia reticulata) and their Utility in Swordtails (Xiphophorus helleri). Current Research Journal of Biological Sciences 2: 161-163.
  • Deng, YZ and NI Naqvi. 2010. A vacuolar glucoamylase, Sga1, participates in glycogen autophagy for proper asexual differentiation in Magnaporthe oryzae. Autophagy 6: 455-461.
  • Yang, SW, HY Chen, J Yang, S Machida, NH Chua and YA Yuan. 2010. Structure of Arabidopsis HYPONASTIC LEAVES1 and its molecular implications for miRNA processing. Structure 18: 594-605.
  • Ramanujam, R and NI Naqvi. 2010. PdeH, a High-Affinity cAMP Phosphodiesterase, Is a Key Regulator of Asexual and Pathogenic Differentiation in Magnaporthe oryzae. PLoS Pathogens 6: e1000897.
  • Lai, J, SK Ng, F Liu, RN Patkar, Y Lu, JR Chan, A Suresh, N Naqvi and G Jedd. 2010. Marker Fusion Tagging, a New Method for the Production of Chromosomally Encoded Fusion Proteins. Eukaryotic Cell 9: 827-830.
  • Tao, S and K Sampath. 2010. Alternative splicing of Smads in differentiation and tissue homeostasis. Development, Growth & Differentiation 52: 335-342.
  • Prabakaran, M, S Madhan, N Prabhu, GY Geng, R New and J Kwang. 2010. Reverse micelle-encapsulated recombinant baculovirus as an oral vaccine against H5N1 infection in mice. Antiviral Research 86: 180-187
  • Meng, T, Q Jia, S Liu, AK Karuppannan, CC Chang and J Kwang. 2010. Characterization and epitope mapping of monoclonal antibodies recognizing N-terminus of Rep of porcine circovirus type 2. Journal of Virological Methods 165: 222-229.
  • Yue, GH, B Kovacs and L Orban. 2010. A New Problem with Cross-Species Amplification of Microsatellites: Generation of Non-Homologous Products. Zoological Research 31: 131−140.
  • Wang, S and DTW Ng. 2010. Evasion of Endoplasmic Reticulum Surveillance Makes Wsc1p an Obligate Substrate of Golgi Quality Control. Molecular Biology of the Cell 21: 1153–1165.
  • Patil, VS and T Kai. 2010. Repression of Retroelements in the Drosophila Germline via piRNA Pathway by the Tudor Domain Protein Tejas. Current Biology 20: 724-730.
  • Sun, B and T Ito. 2010. Floral stem cells: from dynamic balance towards termination. Biochemical Society Transactions 38: 613-616.
  • Jiang, SY, Z Ma and S Ramachandran. 2010. Evolutionary history and stress regulation of the lectin superfamily in higher plants. BMC Evolutionary Biology 10: 79.
  • Kanehara, K, W Xie and DTW Ng. 2010. Modularity of the Hrd1 ERAD complex underlies its diverse client range. The Journal of Cell Biology 188: 707-716.
  • Ji, L, ZD Jiang, Y Liu, CMJ Koh and LH Zhang. 2010. A Simplified and efficient method for transformation and gene tagging of Ustilago maydis using frozen cells. Fungal Genetics and Biology 47: 279-287
  • Jiang, S and S Ramachandran. 2010. Improving Crop Tolerance to Abiotic Stresses by Plant Biotechnology. In Applications of Plant Biotechnology: In vitro Propagation, Plant Transformations and Secondary Metabolite Production (eds. Ashwani Kumar and Sudhir K Sopory) I.K. International Publishing House. Chapter 15: 286-309
  • Jullien, PE and F Berger. 2010. Parental Genome Dosage Imbalance Deregulates Imprinting in Arabidopsis. PLoS Genetics 6: e1000885
  • Andreuzza, S, J Li, AE Guitton, JE Faure, S Casanova, JS Park, Y Choi, Z Chen and F Berger. 2010. DNA LIGASE I exerts a maternal effect on seed development in Arabidopsis thaliana. Development 137: 73-81
  • Prabakaran, M, S Madhan, N Prabhu, Q Jia and J Kwang. 2010. Gastrointestinal Delivery of Baculovirus Displaying Influenza Virus Hemagglutinin Protects Mice against Heterologous H5N1 Infection. Journal of Virology 84: 3201–3209.
  • Zhu, ZY, CM Wang, LC Lo, G Lin, F Feng, J Tan, R Chou, HS Lim, L Orban and GH Yue. 2010. A standard panel of microsatellites for Asian seabass (Lates calcarifer). Animal Genetics ,41: 208-212.
  • Xia, JH, F Liu, ZY Zhu, JJ Fu, JB Feng, JL Li and GH Yue. 2010. A consensus linkage map of the grass carp (Ctenopharyngodon idella) based on microsatellites and SNPs. BMC Genomics 11: 135.
  • Yue, GH, JL Li, CM Wang, JH Xia, GL Wang and JB Feng. 2010. High prevalence of multiple paternity in the invasive crayfish species, Procambarus clarkii. International Journal of Biological Sciences 6: 107-115.
  • Qin, H, F Chen, X Huan, S Machida, J Song and YA Yuan. 2010. Structure of the Arabidopsis thaliana DCL4 DUF283 domain reveals a noncanonical double-stranded RNA-binding fold for protein–protein interaction. RNA 16: 474-481.
  • Karuppannan, AK, S Liu, Q Jia, M Selvaraj and J Kwang. 2010. Porcine circovirus type 2 ORF3 protein competes with p53 in binding to Pirh2 and mediates the deregulation of p53 homeostasis. Virology 398: 1-11.
  • Wang, Y, C Liu, D Yang, H Yu and YC Liou. 2010. Pin1At Encoding a Peptidyl-Prolyl cis/trans Isomerase Regulates Flowering Time in Arabidopsis. Molecular Cell 37: 112–122.
  • Ingouff, M and F Berger. 2010. Histone3 variants in plants. Chromosoma 119: 27–33.
  • Liu, F, JL Li, GH Yue, JJ Fu and ZF Zhou. 2010. Molecular cloning and expression analysis of the liver-expressed antimicrobial peptide 2 (LEAP-2) gene in grass carp. Veterinary Immunology and Immunopathology 133: 133-143.